Associate Professor at Utrecht University, Department of Infectious Diseases & Immunology. (meta)genomes, AMR, zoonotic bugs.
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Assessing your cultural and operational fit
Utrecht University
Data Scientist
June 19, 2026 – Present
metapointfinder
January 17, 2025 – Present
finds and scores resistance causing mutations in long reads
View Projectvibrio_parahaemolyticus_genomoserotyping
June 30, 2021 – May 21, 2025
Kaptive database of O and K antigen clusters of Vibrio parahaemolyticus
View ProjectMicrobial-Genomics-2022
March 16, 2020 – November 13, 2025
https://aldertzomer.github.io/Microbial-Genomics-2022/ Day 3 and 4 of the Microbial Genomics course 2022
View ProjectResistNanome
March 12, 2020 – June 27, 2023
A pipeline to extract microbiome and resistome profiles from Nanopore data from the internship of https://github.com/AStieva/
View ProjectResistNanome
November 8, 2019 – February 12, 2020
A pipeline to easily extract the resistome information of a metagenomic sample sequenced using the Nanopore technique
View Projectcgmlst
May 8, 2019 – October 29, 2019
Fork of mlst of tseemann modified for cgmlst. Not very fast when used with organisms with a large number of allelic variants
View ProjectRFPlasmid
February 16, 2019 – Present
Predicting plasmid contigs from assemblies using single copy marker genes, plasmid genes, kmers - Developed by Linda van der Graaf
View ProjectFastDeMe
February 16, 2019 – March 12, 2020
A fast, easy solution for metagenomic data analysis - Forked from Sander Vermeulens repository, developed during his internship
View ProjectCultural Fit Analysis
The candidate's projects are heavily focused on bioinformatics, genomics, and microbial analysis, indicating a strong specialization. While this demonstrates depth, the lack of diversity in project domains might suggest a narrower scope of interest or experience outside of this specific niche. The current role as a Data Scientist at a university aligns with a research-oriented environment. Without further information on team collaboration or project management styles, a comprehensive cultural fit assessment is limited.
Soft Skills & Operational Fit
Insufficient data to assess soft skills and operational fit. The candidate's project descriptions are brief, and no psychometric or English test scores are available.